Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Paired design
•
reset
2
votes
5
replies
1.6k
views
DESeq2 problem with outlier replacement in paired multi-factor design
deseq2
differential gene expression
multiple factor design
paired design
7.3 years ago
gregory.l.stone
▴ 10
2
votes
2
replies
1.4k
views
EdgeR User Guide: use of glmLRT vs glmQLF in oral carcinoma Case Study
edger
design matrix
glmlrt()
glmQFTest()
paired design
5.5 years ago
oakhamwolf
• 0
3
votes
4
replies
1.2k
views
Complicated unbalanced block DOE with partially paired samples and analysis
limma
complex-design
paired design
updated 6.2 years ago by
Aaron Lun
★ 28k • written 6.2 years ago by
ML18
▴ 10
1
vote
3
replies
1.0k
views
Setting up the design for paired analysis
edger
limma
paired design
5.5 years ago • updated 5.3 years ago
candida.vaz
▴ 50
2
votes
3
replies
864
views
Drug response pre- and post-treatment between timepoints across conditions
RNA-seq
Paired design
Timecourse
Diagnosis
Covariates
updated 4.2 years ago by
Kevin Blighe
★ 3.9k • written 4.2 years ago by
ibrahim.akkouh
• 0
4
votes
3
replies
1.1k
views
Differential profile for only one normal - tumor pair
edger
degs
paired design
updated 5.9 years ago by
Gordon Smyth
50k • written 5.9 years ago by
takumima
▴ 10
3
votes
3
replies
1.4k
views
Difficulties with probable batch effect in paired blocked (treatment and placebo) experiment
deseq2
edger
limma
batch effect
paired design
6.2 years ago
Vladimir Krasikov
▴ 90
7 results • Page
1 of 1
Recent ...
Replies
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Thanks again Guido, I will try to run the script you have suggested and see if I can install the package. Yes, I have seen this message a…
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Guido Hooiveld
★ 4.0k
FWIW: based on [previous posts][1] it is suggested to install like this: install.packages(pkgs="./org.Vdahliae.eg.db", repos=NULL, typ…
Votes
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
Answer: SGSeq: moving toward diffex from SGSeq analysis
Answer: How to design DEXSeq formula for multiple variables
Awards
• All
Popular Question
to
boczniak767
▴ 720
Popular Question
to
jmoon1194
• 0
Popular Question
to
mat.lesche
▴ 90
Popular Question
to
jordi.planells
• 0
Scholar
to
mat149
▴ 70
Locations
• All
United States,
just now
India,
1 minute ago
UPF, Barcelona, Spain,
1 minute ago
United States,
1 minute ago
Ireland,
6 minutes ago
Traffic: 776 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6